Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.2□□□□□ -0.3
Nckap1P28660 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nckap1P28660 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nckap1P28660 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nckap1P28660 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Gm6447-201ENSMUST00000118905 835 ntBASIC13.19□□□□□ -0.3
Nckap1P28660 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.19□□□□□ -0.3
Nckap1P28660 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.19□□□□□ -0.3
Nckap1P28660 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Gm38002-201ENSMUST00000193255 180 ntBASIC13.19□□□□□ -0.3
Nckap1P28660 Gm19309-201ENSMUST00000218295 205 ntBASIC13.19□□□□□ -0.3
Nckap1P28660 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nckap1P28660 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nckap1P28660 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Nckap1P28660 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.19□□□□□ -0.3
Nckap1P28660 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Nckap1P28660 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.19□□□□□ -0.3
Nckap1P28660 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nckap1P28660 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.19□□□□□ -0.3
Nckap1P28660 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nckap1P28660 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Nckap1P28660 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Gm8805-201ENSMUST00000117848 313 ntBASIC13.18□□□□□ -0.3
Nckap1P28660 Gm13123-201ENSMUST00000122173 492 ntBASIC13.18□□□□□ -0.3
Nckap1P28660 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.18□□□□□ -0.3
Nckap1P28660 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.18□□□□□ -0.3
Nckap1P28660 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.18□□□□□ -0.3
Nckap1P28660 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.18□□□□□ -0.3
Nckap1P28660 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.18□□□□□ -0.3
Nckap1P28660 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Snora73a-201ENSMUST00000082453 205 ntBASIC13.18□□□□□ -0.3
Nckap1P28660 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nckap1P28660 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nckap1P28660 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nckap1P28660 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nckap1P28660 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms