Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.34□□□□□ -0.11
Ube3aO08759 Shd-206ENSMUST00000225145 998 ntBASIC14.34□□□□□ -0.11
Ube3aO08759 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ube3aO08759 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ube3aO08759 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3aO08759 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.33□□□□□ -0.11
Ube3aO08759 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3aO08759 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ube3aO08759 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3aO08759 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3aO08759 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3aO08759 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3aO08759 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3aO08759 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.33□□□□□ -0.12
Ube3aO08759 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ube3aO08759 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Gm46209-201ENSMUST00000217912 553 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Gm5779-201ENSMUST00000218467 910 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ube3aO08759 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.33□□□□□ -0.12
Ube3aO08759 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube3aO08759 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube3aO08759 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ube3aO08759 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ube3aO08759 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Ube3aO08759 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.32□□□□□ -0.12
Ube3aO08759 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ube3aO08759 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.32□□□□□ -0.12
Ube3aO08759 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Ube3aO08759 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ube3aO08759 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ube3aO08759 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3aO08759 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ube3aO08759 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ube3aO08759 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ube3aO08759 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3aO08759 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
Ube3aO08759 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube3aO08759 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms