Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AL132875.1-201ENST00000403623 949 ntBASIC19.36■□□□□ 0.69
RNF216Q9NWF9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AL512326.1-201ENST00000443050 721 ntBASIC19.36■□□□□ 0.69
RNF216Q9NWF9 OR52X1P-201ENST00000446117 914 ntBASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC098935.2-201ENST00000604222 466 ntBASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC096586.2-201ENST00000610260 441 ntBASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC107918.4-202ENST00000641623 219 ntBASIC19.36■□□□□ 0.69
RNF216Q9NWF9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF216Q9NWF9 FLJ13224-201ENST00000313737 1514 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL096828.2-201ENST00000567259 1965 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 OR6D1P-203ENST00000641209 4860 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AC016907.1-201ENST00000419483 435 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL732372.2-201ENST00000431321 437 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AC007967.3-201ENST00000434308 558 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 NKAPP1-205ENST00000585790 367 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AC005229.3-201ENST00000603438 323 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 AL445222.1-201ENST00000607259 628 ntBASIC19.35■□□□□ 0.69
RNF216Q9NWF9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF216Q9NWF9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 MIR940-201ENST00000401276 94 ntBASIC19.34■□□□□ 0.69
RNF216Q9NWF9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 HNRNPA1P22-201ENST00000437295 946 ntBASIC19.34■□□□□ 0.69
RNF216Q9NWF9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF216Q9NWF9 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms