Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AL512638.1-201ENST00000457493 794 ntBASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AC012645.4-201ENST00000610691 1061 ntBASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
KIAA1549Q9HCM3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 AL589987.1-201ENST00000453380 819 ntBASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 ZNF890P-202ENST00000530367 1156 ntBASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 AC079328.2-201ENST00000561241 3354 ntBASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KIAA1549Q9HCM3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AP001282.1-201ENST00000531301 1499 ntBASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 AL391005.1-201ENST00000623953 2435 ntBASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KIAA1549Q9HCM3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms