Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gm19220-201ENSMUST00000222682 803 ntBASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Gm25925-201ENSMUST00000158314 306 ntBASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Gm28631-201ENSMUST00000190740 334 ntBASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Khdc3Q9CWU5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm7488-201ENSMUST00000117148 684 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm12859-201ENSMUST00000117834 427 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm5866-201ENSMUST00000177881 973 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm29608-201ENSMUST00000190444 463 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms