Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 RN7SL510P-201ENST00000581311 263 ntBASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 SLC22A20-204ENST00000530038 1673 ntBASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AL353732.1-201ENST00000569618 1459 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AP003680.1-201ENST00000598970 3660 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AL121912.1-201ENST00000603683 238 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC025062.2-201ENST00000605477 670 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC010654.1-201ENST00000615722 808 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC004706.3-202ENST00000621574 984 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC112504.1-201ENST00000623415 1841 ntBASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD3Q9BV44 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
THUMPD3Q9BV44 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AC004870.1-201ENST00000315132 882 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 FAM197Y8-203ENST00000450145 560 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 SLC25A6P2-201ENST00000497974 877 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 RNPS1P1-201ENST00000507437 918 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AC073648.2-201ENST00000510116 352 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms