Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Itm2b-204ENSMUST00000228637 783 ntBASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gm27701-201ENSMUST00000184498 110 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gm19931-201ENSMUST00000198920 368 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gm8463-201ENSMUST00000208573 613 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim9Q8C7M3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim9Q8C7M3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm14350-201ENSMUST00000116642 640 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm14928-201ENSMUST00000120198 477 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm28911-201ENSMUST00000188837 117 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms