Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm11978-201ENSMUST00000122315 466 ntBASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm37497-201ENSMUST00000195830 798 ntBASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm25857-201ENSMUST00000082788 129 ntBASIC13.58□□□□□ -0.24
Nup54Q8BTS4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nup54Q8BTS4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.57□□□□□ -0.24
Nup54Q8BTS4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup54Q8BTS4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Gm8805-201ENSMUST00000117848 313 ntBASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Gm16177-201ENSMUST00000120728 718 ntBASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Gm13123-201ENSMUST00000122173 492 ntBASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.56□□□□□ -0.24
Nup54Q8BTS4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms