Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm8913-201ENSMUST00000209491 641 ntBASIC17■□□□□ 0.31
Chd4Q6PDQ2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Mir874-201ENSMUST00000104769 76 ntBASIC17■□□□□ 0.31
Chd4Q6PDQ2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 B9d1os-201ENSMUST00000137010 674 ntBASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm9678-201ENSMUST00000198979 1149 ntBASIC17■□□□□ 0.31
Chd4Q6PDQ2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd4Q6PDQ2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Gm13315-201ENSMUST00000120376 991 ntBASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Gm11597-201ENSMUST00000121423 964 ntBASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Gm18734-201ENSMUST00000172937 808 ntBASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd4Q6PDQ2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms