Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Notch3Q61982 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.22□□□□□ -0.77
Notch3Q61982 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm37466-201ENSMUST00000195692 652 ntBASIC10.22□□□□□ -0.77
Notch3Q61982 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Notch3Q61982 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Notch3Q61982 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.22□□□□□ -0.77
Notch3Q61982 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Notch3Q61982 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.22□□□□□ -0.77
Notch3Q61982 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.21□□□□□ -0.77
Notch3Q61982 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.21□□□□□ -0.77
Notch3Q61982 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.21□□□□□ -0.77
Notch3Q61982 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Gm18056-201ENSMUST00000207670 568 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Gm18061-201ENSMUST00000208350 562 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Gm18063-201ENSMUST00000208529 568 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Gm18052-201ENSMUST00000208750 559 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Gm29705-201ENSMUST00000212598 474 ntBASIC10.21□□□□□ -0.77
Notch3Q61982 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Notch3Q61982 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Notch3Q61982 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Notch3Q61982 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Notch3Q61982 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Notch3Q61982 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Notch3Q61982 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Notch3Q61982 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Notch3Q61982 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.21□□□□□ -0.78
Notch3Q61982 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.21□□□□□ -0.78
Notch3Q61982 Gm10156-201ENSMUST00000122364 462 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.21□□□□□ -0.78
Notch3Q61982 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.21□□□□□ -0.78
Notch3Q61982 Gm38002-201ENSMUST00000193255 180 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Gm44364-201ENSMUST00000198368 141 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.21□□□□□ -0.78
Notch3Q61982 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.21□□□□□ -0.78
Notch3Q61982 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Notch3Q61982 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Notch3Q61982 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.2□□□□□ -0.78
Notch3Q61982 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.2□□□□□ -0.78
Notch3Q61982 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Gm8213-201ENSMUST00000118191 441 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Notch3Q61982 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.2□□□□□ -0.78
Notch3Q61982 Gm43818-201ENSMUST00000200605 466 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms