Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm14660-201ENSMUST00000119809 575 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm11978-201ENSMUST00000122315 466 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm18062-201ENSMUST00000208020 547 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm18055-201ENSMUST00000208254 547 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm40466-201ENSMUST00000212174 422 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm10146-201ENSMUST00000072739 309 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps54Q5SPW0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm27731-201ENSMUST00000185192 107 ntBASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.9■□□□□ 0.14
Vps54Q5SPW0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.9■□□□□ 0.14
Vps54Q5SPW0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps54Q5SPW0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
Vps54Q5SPW0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Vps54Q5SPW0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms