Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.39□□□□□ -0.27
Bdp1Q571C7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.39□□□□□ -0.27
Bdp1Q571C7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.39□□□□□ -0.27
Bdp1Q571C7 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.39□□□□□ -0.27
Bdp1Q571C7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Bdp1Q571C7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm22058-201ENSMUST00000083393 310 ntBASIC13.38□□□□□ -0.27
Bdp1Q571C7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.38□□□□□ -0.27
Bdp1Q571C7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm6963-201ENSMUST00000147879 379 ntBASIC13.38□□□□□ -0.27
Bdp1Q571C7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm4862-201ENSMUST00000170405 438 ntBASIC13.38□□□□□ -0.27
Bdp1Q571C7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm42518-201ENSMUST00000196277 938 ntBASIC13.38□□□□□ -0.27
Bdp1Q571C7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Bdp1Q571C7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm13736-201ENSMUST00000119272 253 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm14832-201ENSMUST00000121289 322 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm45120-201ENSMUST00000208880 408 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm5616-201ENSMUST00000165252 384 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm8741-201ENSMUST00000174736 384 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Mt1-202ENSMUST00000211807 1085 ntBASIC13.37□□□□□ -0.27
Bdp1Q571C7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.37□□□□□ -0.27
Bdp1Q571C7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.36□□□□□ -0.27
Bdp1Q571C7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Bdp1Q571C7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms