Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ebf1Q07802 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Ebf1Q07802 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm15236-201ENSMUST00000117309 379 ntBASIC13.46□□□□□ -0.25
Ebf1Q07802 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf1Q07802 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf1Q07802 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm27243-201ENSMUST00000183964 521 ntBASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm29608-201ENSMUST00000190444 463 ntBASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm7783-201ENSMUST00000204795 781 ntBASIC13.46□□□□□ -0.25
Ebf1Q07802 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Ebf1Q07802 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ebf1Q07802 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ebf1Q07802 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.46□□□□□ -0.26
Ebf1Q07802 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.46□□□□□ -0.26
Ebf1Q07802 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.46□□□□□ -0.26
Ebf1Q07802 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf1Q07802 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm13350-201ENSMUST00000120519 479 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm8584-201ENSMUST00000171982 758 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm38241-201ENSMUST00000192641 898 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm26315-201ENSMUST00000083890 321 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Gm10268-201ENSMUST00000085340 555 ntBASIC13.45□□□□□ -0.26
Ebf1Q07802 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.45□□□□□ -0.26
Ebf1Q07802 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf1Q07802 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms