Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.61■□□□□ 0.25
PTPN3P26045 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PTPN3P26045 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN3P26045 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN3P26045 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN3P26045 RN7SL589P-201ENST00000481268 310 ntBASIC16.61■□□□□ 0.25
PTPN3P26045 AC105233.2-201ENST00000523697 349 ntBASIC16.61■□□□□ 0.25
PTPN3P26045 AF228730.5-201ENST00000530288 346 ntBASIC16.61■□□□□ 0.25
PTPN3P26045 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN3P26045 AC027307.2-201ENST00000591252 911 ntBASIC16.61■□□□□ 0.25
PTPN3P26045 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
PTPN3P26045 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN3P26045 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTPN3P26045 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN3P26045 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN3P26045 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN3P26045 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN3P26045 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN3P26045 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN3P26045 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN3P26045 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PTPN3P26045 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN3P26045 HTR5BP-201ENST00000430851 1154 ntBASIC16.6■□□□□ 0.25
PTPN3P26045 MKNK2P1-201ENST00000437526 628 ntBASIC16.6■□□□□ 0.25
PTPN3P26045 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN3P26045 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.6■□□□□ 0.25
PTPN3P26045 KRT8P48-201ENST00000515599 1220 ntBASIC16.6■□□□□ 0.25
PTPN3P26045 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN3P26045 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN3P26045 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 MIR4321-201ENST00000592276 80 ntBASIC16.6■□□□□ 0.25
PTPN3P26045 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN3P26045 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 AC026120.1-201ENST00000611536 926 ntBASIC16.6■□□□□ 0.25
PTPN3P26045 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN3P26045 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN3P26045 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN3P26045 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN3P26045 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PTPN3P26045 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PTPN3P26045 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms