Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.08□□□□□ -0.64
Col8a2P25318 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col8a2P25318 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col8a2P25318 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col8a2P25318 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col8a2P25318 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.07□□□□□ -0.64
Col8a2P25318 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Gm8062-201ENSMUST00000139696 444 ntBASIC11.07□□□□□ -0.64
Col8a2P25318 AY702102-202ENSMUST00000194651 1173 ntBASIC11.07□□□□□ -0.64
Col8a2P25318 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.07□□□□□ -0.64
Col8a2P25318 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Col8a2P25318 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.07□□□□□ -0.64
Col8a2P25318 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.07□□□□□ -0.64
Col8a2P25318 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col8a2P25318 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col8a2P25318 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col8a2P25318 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Col8a2P25318 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.06□□□□□ -0.64
Col8a2P25318 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.06□□□□□ -0.64
Col8a2P25318 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.06□□□□□ -0.64
Col8a2P25318 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.06□□□□□ -0.64
Col8a2P25318 Gm27682-201ENSMUST00000183930 110 ntBASIC11.06□□□□□ -0.64
Col8a2P25318 Gm45784-201ENSMUST00000188360 142 ntBASIC11.06□□□□□ -0.64
Col8a2P25318 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.06□□□□□ -0.64
Col8a2P25318 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.06□□□□□ -0.64
Col8a2P25318 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.06□□□□□ -0.64
Col8a2P25318 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.06□□□□□ -0.64
Col8a2P25318 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Gm9823-201ENSMUST00000051212 327 ntBASIC11.06□□□□□ -0.64
Col8a2P25318 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.06□□□□□ -0.64
Col8a2P25318 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col8a2P25318 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
Col8a2P25318 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Col8a2P25318 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a2P25318 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms