Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NgfP01139 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NgfP01139 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NgfP01139 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NgfP01139 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.66□□□□□ -0.54
NgfP01139 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NgfP01139 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.65□□□□□ -0.54
NgfP01139 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.65□□□□□ -0.54
NgfP01139 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.65□□□□□ -0.54
NgfP01139 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NgfP01139 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NgfP01139 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.65□□□□□ -0.54
NgfP01139 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NgfP01139 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.65□□□□□ -0.54
NgfP01139 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.65□□□□□ -0.54
NgfP01139 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.65□□□□□ -0.54
NgfP01139 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.65□□□□□ -0.54
NgfP01139 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.65□□□□□ -0.54
NgfP01139 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NgfP01139 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.65□□□□□ -0.55
NgfP01139 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.65□□□□□ -0.55
NgfP01139 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NgfP01139 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NgfP01139 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
NgfP01139 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
NgfP01139 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
NgfP01139 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
NgfP01139 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.64□□□□□ -0.55
NgfP01139 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.64□□□□□ -0.55
NgfP01139 Gm16570-201ENSMUST00000161951 436 ntBASIC11.64□□□□□ -0.55
NgfP01139 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.64□□□□□ -0.55
NgfP01139 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.64□□□□□ -0.55
NgfP01139 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.64□□□□□ -0.55
NgfP01139 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms