Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Pfdn2O70591 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.12□□□□□ -0.63
Pfdn2O70591 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pfdn2O70591 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm6973-201ENSMUST00000117080 721 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Mir3113-201ENSMUST00000175478 76 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm44492-201ENSMUST00000197012 141 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm7441-201ENSMUST00000220697 1074 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.11□□□□□ -0.63
Pfdn2O70591 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.11□□□□□ -0.63
Pfdn2O70591 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn2O70591 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn2O70591 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Pfdn2O70591 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn2O70591 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.1□□□□□ -0.63
Pfdn2O70591 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn2O70591 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms