Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Vamp8O70404 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.28□□□□□ -0.92
Vamp8O70404 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vamp8O70404 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
Vamp8O70404 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.27□□□□□ -0.92
Vamp8O70404 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.27□□□□□ -0.92
Vamp8O70404 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Vamp8O70404 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vamp8O70404 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.27□□□□□ -0.92
Vamp8O70404 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.27□□□□□ -0.92
Vamp8O70404 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vamp8O70404 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.27□□□□□ -0.92
Vamp8O70404 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.93
Vamp8O70404 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.27□□□□□ -0.93
Vamp8O70404 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Vamp8O70404 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.27□□□□□ -0.93
Vamp8O70404 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
Vamp8O70404 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Vamp8O70404 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.27□□□□□ -0.93
Vamp8O70404 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Vamp8O70404 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.27□□□□□ -0.93
Vamp8O70404 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vamp8O70404 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
Vamp8O70404 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm8520-201ENSMUST00000186517 868 ntBASIC9.26□□□□□ -0.93
Vamp8O70404 Gm37153-201ENSMUST00000193637 231 ntBASIC9.26□□□□□ -0.93
Vamp8O70404 Gm18246-201ENSMUST00000221023 728 ntBASIC9.26□□□□□ -0.93
Vamp8O70404 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.26□□□□□ -0.93
Vamp8O70404 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.26□□□□□ -0.93
Vamp8O70404 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Vamp8O70404 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vamp8O70404 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms