Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.21□□□□□ -0.61
Cxcl13O55038 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl13O55038 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl13O55038 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cxcl13O55038 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.21□□□□□ -0.61
Cxcl13O55038 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cxcl13O55038 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl13O55038 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.21□□□□□ -0.61
Cxcl13O55038 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.21□□□□□ -0.61
Cxcl13O55038 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.21□□□□□ -0.61
Cxcl13O55038 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Gm9823-201ENSMUST00000051212 327 ntBASIC11.21□□□□□ -0.61
Cxcl13O55038 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl13O55038 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cxcl13O55038 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cxcl13O55038 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.21□□□□□ -0.62
Cxcl13O55038 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cxcl13O55038 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl13O55038 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.2□□□□□ -0.62
Cxcl13O55038 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.2□□□□□ -0.62
Cxcl13O55038 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm16379-201ENSMUST00000161469 348 ntBASIC11.2□□□□□ -0.62
Cxcl13O55038 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Cxcl13O55038 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cxcl13O55038 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm8762-201ENSMUST00000193486 339 ntBASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm43179-201ENSMUST00000198797 275 ntBASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.2□□□□□ -0.62
Cxcl13O55038 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.2□□□□□ -0.62
Cxcl13O55038 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl13O55038 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.19□□□□□ -0.62
Cxcl13O55038 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.19□□□□□ -0.62
Cxcl13O55038 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.19□□□□□ -0.62
Cxcl13O55038 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcl13O55038 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms