Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2A1O14983 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP2A1O14983 SLC7A15P-201ENST00000424028 1363 ntBASIC18.57■□□□□ 0.56
ATP2A1O14983 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP2A1O14983 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2A1O14983 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP2A1O14983 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 MEP1AP4-201ENST00000423244 1087 ntBASIC18.57■□□□□ 0.56
ATP2A1O14983 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP2A1O14983 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP2A1O14983 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP2A1O14983 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP2A1O14983 AC099568.2-201ENST00000609194 695 ntBASIC18.57■□□□□ 0.56
ATP2A1O14983 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
ATP2A1O14983 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 AL136982.4-201ENST00000437689 1740 ntBASIC18.57■□□□□ 0.56
ATP2A1O14983 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2A1O14983 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A1O14983 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ATP2A1O14983 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ATP2A1O14983 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP2A1O14983 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
ATP2A1O14983 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATP2A1O14983 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ATP2A1O14983 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ATP2A1O14983 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP2A1O14983 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP2A1O14983 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.56■□□□□ 0.56
ATP2A1O14983 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.56■□□□□ 0.56
ATP2A1O14983 CHCHD2P3-201ENST00000603038 451 ntBASIC18.56■□□□□ 0.56
ATP2A1O14983 AL109936.8-201ENST00000641772 604 ntBASIC18.56■□□□□ 0.56
ATP2A1O14983 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 AC138969.3-201ENST00000546612 1459 ntBASIC18.56■□□□□ 0.56
ATP2A1O14983 AC138932.2-201ENST00000548268 1459 ntBASIC18.56■□□□□ 0.56
ATP2A1O14983 AC126755.4-201ENST00000549796 1459 ntBASIC18.56■□□□□ 0.56
ATP2A1O14983 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATP2A1O14983 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
ATP2A1O14983 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2A1O14983 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP2A1O14983 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP2A1O14983 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATP2A1O14983 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
ATP2A1O14983 DGCR5-201ENST00000399539 862 ntBASIC18.55■□□□□ 0.56
ATP2A1O14983 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.55■□□□□ 0.56
ATP2A1O14983 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.55■□□□□ 0.56
ATP2A1O14983 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 AC055876.2-201ENST00000531834 546 ntBASIC18.55■□□□□ 0.56
ATP2A1O14983 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms