Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2a1Q99PM3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2a1Q99PM3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Gm9172-201ENSMUST00000212092 954 ntBASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2a1Q99PM3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2a1Q99PM3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms