Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.34■□□□□ 0.37
DDX1Q92499 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 AC243562.1-201ENST00000560672 389 ntBASIC17.34■□□□□ 0.37
DDX1Q92499 AL135744.1-201ENST00000565098 629 ntBASIC17.34■□□□□ 0.37
DDX1Q92499 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 AC012645.4-201ENST00000610691 1061 ntBASIC17.34■□□□□ 0.37
DDX1Q92499 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 AC046158.3-201ENST00000624947 2558 ntBASIC17.34■□□□□ 0.37
DDX1Q92499 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DDX1Q92499 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 AC132872.4-202ENST00000622924 2756 ntBASIC17.34■□□□□ 0.37
DDX1Q92499 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.33■□□□□ 0.37
DDX1Q92499 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX1Q92499 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.33■□□□□ 0.37
DDX1Q92499 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.33■□□□□ 0.37
DDX1Q92499 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX1Q92499 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.33■□□□□ 0.37
DDX1Q92499 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX1Q92499 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DDX1Q92499 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
DDX1Q92499 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.33■□□□□ 0.37
DDX1Q92499 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
DDX1Q92499 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.33■□□□□ 0.37
DDX1Q92499 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX1Q92499 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 AC015922.1-201ENST00000421102 1152 ntBASIC17.33■□□□□ 0.36
DDX1Q92499 FAM86GP-201ENST00000448322 971 ntBASIC17.33■□□□□ 0.36
DDX1Q92499 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.33■□□□□ 0.36
DDX1Q92499 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX1Q92499 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
DDX1Q92499 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX1Q92499 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
DDX1Q92499 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX1Q92499 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX1Q92499 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX1Q92499 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX1Q92499 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX1Q92499 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.32■□□□□ 0.36
DDX1Q92499 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX1Q92499 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
DDX1Q92499 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 AC005225.4-201ENST00000557330 545 ntBASIC17.32■□□□□ 0.36
DDX1Q92499 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX1Q92499 LINC01225-203ENST00000563550 1244 ntBASIC17.32■□□□□ 0.36
DDX1Q92499 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX1Q92499 MIR4321-201ENST00000592276 80 ntBASIC17.32■□□□□ 0.36
DDX1Q92499 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 AL365330.1-201ENST00000607459 531 ntBASIC17.32■□□□□ 0.36
DDX1Q92499 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 PAUPAR-201ENST00000630360 2965 ntBASIC17.32■□□□□ 0.36
DDX1Q92499 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms