Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb11Q91UZ8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Gm6447-201ENSMUST00000118905 835 ntBASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Gm7653-201ENSMUST00000214567 508 ntBASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Itm2b-204ENSMUST00000228637 783 ntBASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb11Q91UZ8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms