Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vps39Q8R5L3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vps39Q8R5L3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps39Q8R5L3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.33□□□□□ -0.27
Vps39Q8R5L3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
Vps39Q8R5L3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vps39Q8R5L3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Gm15487-201ENSMUST00000122373 465 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Gm5279-201ENSMUST00000199575 745 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps39Q8R5L3 Syt7-205ENSMUST00000224135 1557 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm12403-201ENSMUST00000121384 959 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm29667-201ENSMUST00000190817 490 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm45841-201ENSMUST00000207700 164 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms