Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TwistnbQ78WZ7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Dupd1-202ENSMUST00000224735 548 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.53□□□□□ -0.24
TwistnbQ78WZ7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TwistnbQ78WZ7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TwistnbQ78WZ7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms