Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm44855-201ENSMUST00000205725 362 ntBASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Gm7730-201ENSMUST00000212486 454 ntBASIC12.53□□□□□ -0.4
Brf2Q3UAW9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Brf2Q3UAW9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Brf2Q3UAW9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.52□□□□□ -0.41
Brf2Q3UAW9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.52□□□□□ -0.41
Brf2Q3UAW9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms