Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Smn1P97801 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Smn1P97801 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smn1P97801 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.4□□□□□ -0.59
Smn1P97801 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Smn1P97801 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smn1P97801 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smn1P97801 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Smn1P97801 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smn1P97801 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smn1P97801 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Smn1P97801 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.39□□□□□ -0.59
Smn1P97801 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smn1P97801 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smn1P97801 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smn1P97801 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.39□□□□□ -0.59
Smn1P97801 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.39□□□□□ -0.59
Smn1P97801 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.39□□□□□ -0.59
Smn1P97801 Shd-206ENSMUST00000225145 998 ntBASIC11.39□□□□□ -0.59
Smn1P97801 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.39□□□□□ -0.59
Smn1P97801 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.39□□□□□ -0.59
Smn1P97801 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smn1P97801 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.38□□□□□ -0.59
Smn1P97801 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.38□□□□□ -0.59
Smn1P97801 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Gm22065-201ENSMUST00000103753 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm22066-201ENSMUST00000103761 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24932-201ENSMUST00000103763 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24115-201ENSMUST00000103799 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm22190-201ENSMUST00000103827 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm22191-201ENSMUST00000103831 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24721-201ENSMUST00000103849 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm28018-201ENSMUST00000103869 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm26399-201ENSMUST00000103937 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm8410-201ENSMUST00000117225 605 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.38□□□□□ -0.59
Smn1P97801 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Gm25349-201ENSMUST00000177728 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm23616-201ENSMUST00000177797 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm25871-201ENSMUST00000177816 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24752-201ENSMUST00000178240 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24496-201ENSMUST00000178287 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm25649-201ENSMUST00000178476 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm25548-201ENSMUST00000178681 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm23147-201ENSMUST00000178841 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm26095-201ENSMUST00000179270 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm22171-201ENSMUST00000179283 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm23936-201ENSMUST00000179354 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm22619-201ENSMUST00000179516 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm25255-201ENSMUST00000179579 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24755-201ENSMUST00000179691 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm26506-201ENSMUST00000179692 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm25086-201ENSMUST00000179931 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm23243-201ENSMUST00000180047 110 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms