Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.16□□□□□ -0.3
Crnkl1P63154 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Gm10253-201ENSMUST00000194270 940 ntBASIC13.16□□□□□ -0.3
Crnkl1P63154 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.16□□□□□ -0.3
Crnkl1P63154 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.16□□□□□ -0.3
Crnkl1P63154 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.16□□□□□ -0.3
Crnkl1P63154 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.16□□□□□ -0.3
Crnkl1P63154 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.16□□□□□ -0.3
Crnkl1P63154 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crnkl1P63154 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.15□□□□□ -0.3
Crnkl1P63154 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Crnkl1P63154 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Gm5479-201ENSMUST00000160578 435 ntBASIC13.15□□□□□ -0.3
Crnkl1P63154 Gm9824-201ENSMUST00000178707 561 ntBASIC13.15□□□□□ -0.3
Crnkl1P63154 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.15□□□□□ -0.3
Crnkl1P63154 Gm7774-201ENSMUST00000200064 533 ntBASIC13.15□□□□□ -0.3
Crnkl1P63154 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.15□□□□□ -0.3
Crnkl1P63154 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.15□□□□□ -0.3
Crnkl1P63154 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Crnkl1P63154 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.15□□□□□ -0.3
Crnkl1P63154 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Crnkl1P63154 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crnkl1P63154 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Crnkl1P63154 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Crnkl1P63154 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Crnkl1P63154 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.14□□□□□ -0.31
Crnkl1P63154 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Crnkl1P63154 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Crnkl1P63154 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Crnkl1P63154 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Crnkl1P63154 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Crnkl1P63154 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.14□□□□□ -0.31
Crnkl1P63154 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Crnkl1P63154 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Crnkl1P63154 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms