Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 AP003680.1-201ENST00000598970 3660 ntBASIC12.48□□□□□ -0.41
TCRAP04437 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TCRAP04437 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
TCRAP04437 AP005117.1-201ENST00000584346 1413 ntBASIC12.47□□□□□ -0.41
TCRAP04437 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
TCRAP04437 AC020658.6-201ENST00000623564 1870 ntBASIC12.47□□□□□ -0.41
TCRAP04437 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 AC005332.1-201ENST00000577698 1310 ntBASIC12.47□□□□□ -0.41
TCRAP04437 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRAP04437 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.47□□□□□ -0.41
TCRAP04437 AC104819.1-201ENST00000504587 486 ntBASIC12.47□□□□□ -0.41
TCRAP04437 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRAP04437 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 MIR5100-201ENST00000579544 119 ntBASIC12.47□□□□□ -0.41
TCRAP04437 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRAP04437 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRAP04437 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 AL589182.2-201ENST00000619332 1049 ntBASIC12.47□□□□□ -0.41
TCRAP04437 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 TMBIM7P-203ENST00000641617 1718 ntBASIC12.47□□□□□ -0.41
TCRAP04437 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRAP04437 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TCRAP04437 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TCRAP04437 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRAP04437 AC136621.1-201ENST00000624017 2304 ntBASIC12.46□□□□□ -0.41
TCRAP04437 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TCRAP04437 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
TCRAP04437 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TCRAP04437 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRAP04437 AC006486.2-201ENST00000624246 2199 ntBASIC12.46□□□□□ -0.41
TCRAP04437 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRAP04437 AC005622.1-201ENST00000636801 1703 ntBASIC12.46□□□□□ -0.41
TCRAP04437 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRAP04437 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms