Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpne8Q9DC53 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpne8Q9DC53 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Mir7221-201ENSMUST00000184009 72 ntBASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.87□□□□□ -0.19
Cpne8Q9DC53 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpne8Q9DC53 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpne8Q9DC53 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms