Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.58□□□□□ -0.4
Clrn1Q8K445 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm13689-201ENSMUST00000119360 685 ntBASIC12.58□□□□□ -0.4
Clrn1Q8K445 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.58□□□□□ -0.4
Clrn1Q8K445 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm15371-201ENSMUST00000117057 784 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm12091-201ENSMUST00000146791 830 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Mir7654-201ENSMUST00000185082 70 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm45668-201ENSMUST00000211271 493 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.57□□□□□ -0.4
Clrn1Q8K445 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn1Q8K445 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms