Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ClpbQ60649 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.81□□□□□ -0.36
ClpbQ60649 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ClpbQ60649 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.81□□□□□ -0.36
ClpbQ60649 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Gm12138-201ENSMUST00000122180 951 ntBASIC12.81□□□□□ -0.36
ClpbQ60649 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ClpbQ60649 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ClpbQ60649 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ClpbQ60649 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Gm27701-201ENSMUST00000184498 110 ntBASIC12.81□□□□□ -0.36
ClpbQ60649 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.81□□□□□ -0.36
ClpbQ60649 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.81□□□□□ -0.36
ClpbQ60649 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.81□□□□□ -0.36
ClpbQ60649 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.81□□□□□ -0.36
ClpbQ60649 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.81□□□□□ -0.36
ClpbQ60649 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ClpbQ60649 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
ClpbQ60649 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.81□□□□□ -0.36
ClpbQ60649 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
ClpbQ60649 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClpbQ60649 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClpbQ60649 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.8□□□□□ -0.36
ClpbQ60649 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.8□□□□□ -0.36
ClpbQ60649 Gm12485-201ENSMUST00000119641 291 ntBASIC12.8□□□□□ -0.36
ClpbQ60649 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.8□□□□□ -0.36
ClpbQ60649 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClpbQ60649 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClpbQ60649 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.8□□□□□ -0.36
ClpbQ60649 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpbQ60649 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.8□□□□□ -0.36
ClpbQ60649 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
ClpbQ60649 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpbQ60649 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.79□□□□□ -0.36
ClpbQ60649 Gm28911-201ENSMUST00000188837 117 ntBASIC12.79□□□□□ -0.36
ClpbQ60649 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.79□□□□□ -0.36
ClpbQ60649 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.79□□□□□ -0.36
ClpbQ60649 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.79□□□□□ -0.36
ClpbQ60649 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.79□□□□□ -0.36
ClpbQ60649 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms