Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rps28P62858 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rps28P62858 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rps28P62858 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Rps28P62858 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rps28P62858 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rps28P62858 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rps28P62858 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 AC153380.1-201ENSMUST00000214959 2364 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Gm43457-201ENSMUST00000200867 2409 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Gm38005-201ENSMUST00000194845 2745 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC7.7□□□□□ -1.18
Rps28P62858 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Ptprm-203ENSMUST00000224091 3773 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 AC093043.1-201ENSMUST00000226700 898 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Gm37307-201ENSMUST00000193663 2621 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Rps28P62858 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Gm5466-201ENSMUST00000119395 1890 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Gm42853-201ENSMUST00000201273 1387 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rps28P62858 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Rps28P62858 AC154527.4-201ENSMUST00000224364 1667 ntBASIC7.7□□□□□ -1.18
Rps28P62858 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC7.7□□□□□ -1.18
Rps28P62858 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rps28P62858 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Gm43045-201ENSMUST00000198725 2095 ntBASIC7.69□□□□□ -1.18
Rps28P62858 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Zfp264-201ENSMUST00000208656 1563 ntBASIC7.69□□□□□ -1.18
Rps28P62858 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC7.69□□□□□ -1.18
Rps28P62858 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC7.69□□□□□ -1.18
Rps28P62858 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Rps28P62858 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rps28P62858 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms