Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 FAM8A2P-201ENST00000528813 1142 ntBASIC17.04■□□□□ 0.32
ERVFC1P60507 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.04■□□□□ 0.32
ERVFC1P60507 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.04■□□□□ 0.32
ERVFC1P60507 AL583810.1-201ENST00000553344 1045 ntBASIC17.04■□□□□ 0.32
ERVFC1P60507 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.04■□□□□ 0.32
ERVFC1P60507 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.04■□□□□ 0.32
ERVFC1P60507 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.04■□□□□ 0.32
ERVFC1P60507 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.04■□□□□ 0.32
ERVFC1P60507 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.04■□□□□ 0.32
ERVFC1P60507 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 PDIA3P1-201ENST00000471856 1510 ntBASIC17.04■□□□□ 0.32
ERVFC1P60507 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.04■□□□□ 0.32
ERVFC1P60507 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ERVFC1P60507 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.04■□□□□ 0.32
ERVFC1P60507 LINC01144-201ENST00000626198 1710 ntBASIC17.04■□□□□ 0.32
ERVFC1P60507 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ERVFC1P60507 KRT8P22-201ENST00000562317 1415 ntBASIC17.04■□□□□ 0.32
ERVFC1P60507 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ERVFC1P60507 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERVFC1P60507 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ERVFC1P60507 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
ERVFC1P60507 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.03■□□□□ 0.32
ERVFC1P60507 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.03■□□□□ 0.32
ERVFC1P60507 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ERVFC1P60507 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.03■□□□□ 0.32
ERVFC1P60507 AC139713.2-201ENST00000641328 2723 ntBASIC17.03■□□□□ 0.32
ERVFC1P60507 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.03■□□□□ 0.32
ERVFC1P60507 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ERVFC1P60507 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERVFC1P60507 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERVFC1P60507 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.03■□□□□ 0.32
ERVFC1P60507 ACTBP11-201ENST00000436287 1126 ntBASIC17.03■□□□□ 0.32
ERVFC1P60507 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.03■□□□□ 0.32
ERVFC1P60507 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.03■□□□□ 0.32
ERVFC1P60507 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.03■□□□□ 0.32
ERVFC1P60507 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.03■□□□□ 0.32
ERVFC1P60507 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.03■□□□□ 0.32
ERVFC1P60507 AL158212.4-201ENST00000624062 1286 ntBASIC17.03■□□□□ 0.32
ERVFC1P60507 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.03■□□□□ 0.32
ERVFC1P60507 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ERVFC1P60507 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERVFC1P60507 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ERVFC1P60507 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ERVFC1P60507 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ERVFC1P60507 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.02■□□□□ 0.32
ERVFC1P60507 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.02■□□□□ 0.32
ERVFC1P60507 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.02■□□□□ 0.32
ERVFC1P60507 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.02■□□□□ 0.32
ERVFC1P60507 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.02■□□□□ 0.32
ERVFC1P60507 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.02■□□□□ 0.32
ERVFC1P60507 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.02■□□□□ 0.32
ERVFC1P60507 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.02■□□□□ 0.32
ERVFC1P60507 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
ERVFC1P60507 GPR182-203ENST00000622922 591 ntBASIC17.02■□□□□ 0.32
ERVFC1P60507 CU634019.7-201ENST00000624153 1185 ntBASIC17.02■□□□□ 0.32
ERVFC1P60507 FP236241.2-201ENST00000624906 1185 ntBASIC17.02■□□□□ 0.32
ERVFC1P60507 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.02■□□□□ 0.32
ERVFC1P60507 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.02■□□□□ 0.32
ERVFC1P60507 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERVFC1P60507 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.02■□□□□ 0.32
ERVFC1P60507 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERVFC1P60507 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERVFC1P60507 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
ERVFC1P60507 AL691432.1-201ENST00000596308 1422 ntBASIC17.02■□□□□ 0.31
ERVFC1P60507 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERVFC1P60507 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERVFC1P60507 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms