Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RHBDL3P58872 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.13■□□□□ 0.65
RHBDL3P58872 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AP006294.1-201ENST00000415407 339 ntBASIC19.13■□□□□ 0.65
RHBDL3P58872 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 KRT17P7-201ENST00000451704 1104 ntBASIC19.13■□□□□ 0.65
RHBDL3P58872 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AC132938.2-201ENST00000579188 680 ntBASIC19.13■□□□□ 0.65
RHBDL3P58872 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AL591163.1-201ENST00000641757 987 ntBASIC19.13■□□□□ 0.65
RHBDL3P58872 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.13■□□□□ 0.65
RHBDL3P58872 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RHBDL3P58872 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.13■□□□□ 0.65
RHBDL3P58872 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RHBDL3P58872 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RHBDL3P58872 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RHBDL3P58872 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RHBDL3P58872 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RHBDL3P58872 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RHBDL3P58872 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.12■□□□□ 0.65
RHBDL3P58872 RPL13P2-201ENST00000440687 659 ntBASIC19.12■□□□□ 0.65
RHBDL3P58872 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.12■□□□□ 0.65
RHBDL3P58872 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.12■□□□□ 0.65
RHBDL3P58872 MYCLP2-201ENST00000449268 967 ntBASIC19.12■□□□□ 0.65
RHBDL3P58872 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.12■□□□□ 0.65
RHBDL3P58872 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RHBDL3P58872 AC123567.1-201ENST00000548294 1261 ntBASIC19.12■□□□□ 0.65
RHBDL3P58872 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 MIR8072-201ENST00000614241 80 ntBASIC19.12■□□□□ 0.65
RHBDL3P58872 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RHBDL3P58872 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RHBDL3P58872 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RHBDL3P58872 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RHBDL3P58872 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RHBDL3P58872 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.11■□□□□ 0.65
RHBDL3P58872 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.11■□□□□ 0.65
RHBDL3P58872 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.11■□□□□ 0.65
RHBDL3P58872 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 RN7SL752P-201ENST00000463779 287 ntBASIC19.11■□□□□ 0.65
RHBDL3P58872 GIMAP3P-201ENST00000495150 836 ntBASIC19.11■□□□□ 0.65
RHBDL3P58872 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RHBDL3P58872 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.11■□□□□ 0.65
RHBDL3P58872 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RHBDL3P58872 AC093726.1-201ENST00000608064 963 ntBASIC19.11■□□□□ 0.65
RHBDL3P58872 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
RHBDL3P58872 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RHBDL3P58872 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RHBDL3P58872 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RHBDL3P58872 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 AL512384.1-201ENST00000406683 331 ntBASIC19.1■□□□□ 0.65
RHBDL3P58872 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms