Protein–RNA interactions for Protein: P07350

Ifna6, Interferon alpha-6, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna6P07350 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.92□□□□□ -0.66
Ifna6P07350 Gm6912-201ENSMUST00000117218 544 ntBASIC10.92□□□□□ -0.66
Ifna6P07350 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.92□□□□□ -0.66
Ifna6P07350 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ifna6P07350 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Gm19931-201ENSMUST00000198920 368 ntBASIC10.92□□□□□ -0.66
Ifna6P07350 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.92□□□□□ -0.66
Ifna6P07350 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.92□□□□□ -0.66
Ifna6P07350 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.92□□□□□ -0.66
Ifna6P07350 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ifna6P07350 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ifna6P07350 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.92□□□□□ -0.66
Ifna6P07350 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ifna6P07350 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.91□□□□□ -0.66
Ifna6P07350 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.91□□□□□ -0.66
Ifna6P07350 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.91□□□□□ -0.66
Ifna6P07350 Mir1895-201ENSMUST00000122615 79 ntBASIC10.91□□□□□ -0.66
Ifna6P07350 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm18889-201ENSMUST00000174284 929 ntBASIC10.91□□□□□ -0.66
Ifna6P07350 Gm27494-201ENSMUST00000184735 189 ntBASIC10.91□□□□□ -0.66
Ifna6P07350 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.91□□□□□ -0.66
Ifna6P07350 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.91□□□□□ -0.66
Ifna6P07350 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.91□□□□□ -0.66
Ifna6P07350 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Ifna6P07350 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ifna6P07350 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.91□□□□□ -0.66
Ifna6P07350 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.91□□□□□ -0.66
Ifna6P07350 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ifna6P07350 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ifna6P07350 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ifna6P07350 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ifna6P07350 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.9□□□□□ -0.66
Ifna6P07350 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ifna6P07350 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ifna6P07350 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ifna6P07350 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Ifna6P07350 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms