Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNQ3O43525 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNQ3O43525 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.78■□□□□ 0.92
KCNQ3O43525 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNQ3O43525 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
KCNQ3O43525 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNQ3O43525 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KCNQ3O43525 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
KCNQ3O43525 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNQ3O43525 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNQ3O43525 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.78■□□□□ 0.92
KCNQ3O43525 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNQ3O43525 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
KCNQ3O43525 ME2P1-201ENST00000426028 1970 ntBASIC20.77■□□□□ 0.92
KCNQ3O43525 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
KCNQ3O43525 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNQ3O43525 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KCNQ3O43525 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNQ3O43525 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNQ3O43525 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 AC074338.1-201ENST00000416825 156 ntBASIC20.77■□□□□ 0.92
KCNQ3O43525 ELK1P1-201ENST00000485699 580 ntBASIC20.77■□□□□ 0.92
KCNQ3O43525 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.77■□□□□ 0.92
KCNQ3O43525 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNQ3O43525 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KCNQ3O43525 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KCNQ3O43525 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNQ3O43525 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNQ3O43525 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KCNQ3O43525 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNQ3O43525 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
KCNQ3O43525 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.77■□□□□ 0.91
KCNQ3O43525 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.77■□□□□ 0.91
KCNQ3O43525 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KCNQ3O43525 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.77■□□□□ 0.91
KCNQ3O43525 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 BNIP3P1-202ENST00000550043 1585 ntBASIC20.76■□□□□ 0.91
KCNQ3O43525 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
KCNQ3O43525 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNQ3O43525 OR8S1-201ENST00000310194 1080 ntBASIC20.76■□□□□ 0.91
KCNQ3O43525 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KCNQ3O43525 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNQ3O43525 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
KCNQ3O43525 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
KCNQ3O43525 AC092337.1-201ENST00000568699 1129 ntBASIC20.76■□□□□ 0.91
KCNQ3O43525 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNQ3O43525 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
KCNQ3O43525 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNQ3O43525 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNQ3O43525 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNQ3O43525 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
KCNQ3O43525 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNQ3O43525 AL391825.1-201ENST00000457671 1364 ntBASIC20.75■□□□□ 0.91
KCNQ3O43525 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.75■□□□□ 0.91
KCNQ3O43525 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms