Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Gm24420-201ENSMUST00000176676 59 ntBASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1bQ9Z2C6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gm4804-201ENSMUST00000182234 999 ntBASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gm27494-201ENSMUST00000184735 189 ntBASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Gm10175-201ENSMUST00000086013 645 ntBASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1bQ9Z2C6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Gm24543-201ENSMUST00000103867 82 ntBASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Gm6912-201ENSMUST00000117218 544 ntBASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms