Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 ACTG1P14-201ENST00000446382 1122 ntBASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 DNAJB3-201ENST00000446806 729 ntBASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4E1Q9UPM8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SPDYE11-202ENST00000450699 704 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SPDYE9P-201ENST00000570642 692 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AC073389.1-201ENST00000595595 795 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AC026120.1-201ENST00000611536 926 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SPDYE10P-202ENST00000612005 668 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 SPDYE8P-202ENST00000612377 668 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4E1Q9UPM8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AL589702.1-201ENST00000641229 1509 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms