Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm21854-201ENSMUST00000179901 471 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm27838-201ENSMUST00000184829 128 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm20445-201ENSMUST00000061905 565 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Mir874-201ENSMUST00000104769 76 ntBASIC12.91□□□□□ -0.34
Cstf3Q99LI7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Mir8102-201ENSMUST00000184148 139 ntBASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cstf3Q99LI7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms