Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb13Q91Y06 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Gm36991-201ENSMUST00000191800 648 ntBASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Gm38144-201ENSMUST00000192790 465 ntBASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Gm6218-201ENSMUST00000219812 628 ntBASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb13Q91Y06 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb13Q91Y06 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Mir874-201ENSMUST00000104769 76 ntBASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Gm44855-201ENSMUST00000205725 362 ntBASIC13.46□□□□□ -0.25
Pcdhb13Q91Y06 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms