Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 AL353705.2-201ENST00000428243 662 ntBASIC19.2■□□□□ 0.66
STAG1Q8WVM7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.2■□□□□ 0.66
STAG1Q8WVM7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 AC003101.2-201ENST00000612557 442 ntBASIC19.2■□□□□ 0.66
STAG1Q8WVM7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 CYP2T1P-202ENST00000641596 2535 ntBASIC19.19■□□□□ 0.66
STAG1Q8WVM7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AL596087.1-201ENST00000400979 1969 ntBASIC19.19■□□□□ 0.66
STAG1Q8WVM7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 AL096865.1-201ENST00000606796 927 ntBASIC19.19■□□□□ 0.66
STAG1Q8WVM7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.19■□□□□ 0.66
STAG1Q8WVM7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AL391005.1-201ENST00000623953 2435 ntBASIC19.18■□□□□ 0.66
STAG1Q8WVM7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AC107890.1-201ENST00000422478 521 ntBASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AC055876.3-201ENST00000431496 288 ntBASIC19.18■□□□□ 0.66
STAG1Q8WVM7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AC105021.1-202ENST00000570572 669 ntBASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 LINC02084-201ENST00000606069 1096 ntBASIC19.18■□□□□ 0.66
STAG1Q8WVM7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 AC138649.4-201ENST00000612222 287 ntBASIC19.18■□□□□ 0.66
STAG1Q8WVM7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.18■□□□□ 0.66
STAG1Q8WVM7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms