Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Gm4804-201ENSMUST00000182234 999 ntBASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup35Q8R4R6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Gm24543-201ENSMUST00000103867 82 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Gm6912-201ENSMUST00000117218 544 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Gm27494-201ENSMUST00000184735 189 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Gm10175-201ENSMUST00000086013 645 ntBASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup35Q8R4R6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms