Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.06□□□□□ -0.16
Uba3Q8C878 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.06□□□□□ -0.16
Uba3Q8C878 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.06□□□□□ -0.16
Uba3Q8C878 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.06□□□□□ -0.16
Uba3Q8C878 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Uba3Q8C878 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Uba3Q8C878 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.05□□□□□ -0.16
Uba3Q8C878 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.05□□□□□ -0.16
Uba3Q8C878 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gm5745-201ENSMUST00000183748 313 ntBASIC14.05□□□□□ -0.16
Uba3Q8C878 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.05□□□□□ -0.16
Uba3Q8C878 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.05□□□□□ -0.16
Uba3Q8C878 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.05□□□□□ -0.16
Uba3Q8C878 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.05□□□□□ -0.16
Uba3Q8C878 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.05□□□□□ -0.16
Uba3Q8C878 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.05□□□□□ -0.16
Uba3Q8C878 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Uba3Q8C878 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Uba3Q8C878 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Uba3Q8C878 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.04□□□□□ -0.16
Uba3Q8C878 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.04□□□□□ -0.16
Uba3Q8C878 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.04□□□□□ -0.16
Uba3Q8C878 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.04□□□□□ -0.16
Uba3Q8C878 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Uba3Q8C878 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Uba3Q8C878 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Uba3Q8C878 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Uba3Q8C878 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Uba3Q8C878 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Uba3Q8C878 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Uba3Q8C878 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Uba3Q8C878 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Uba3Q8C878 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Uba3Q8C878 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Uba3Q8C878 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms