Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm12895-201ENSMUST00000122214 226 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cops9Q3U898 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Cops9Q3U898 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm5682-201ENSMUST00000173402 505 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Cops9Q3U898 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cops9Q3U898 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.1□□□□□ -0.95
Cops9Q3U898 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.1□□□□□ -0.95
Cops9Q3U898 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.1□□□□□ -0.95
Cops9Q3U898 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.1□□□□□ -0.95
Cops9Q3U898 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.1□□□□□ -0.95
Cops9Q3U898 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC9.1□□□□□ -0.95
Cops9Q3U898 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.1□□□□□ -0.95
Cops9Q3U898 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cops9Q3U898 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms