Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.95□□□□□ -0.66
Trim63Q38HM4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.95□□□□□ -0.66
Trim63Q38HM4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.94□□□□□ -0.66
Trim63Q38HM4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.94□□□□□ -0.66
Trim63Q38HM4 Gm37722-201ENSMUST00000193757 208 ntBASIC10.94□□□□□ -0.66
Trim63Q38HM4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Gm21814-202ENSMUST00000203277 873 ntBASIC10.94□□□□□ -0.66
Trim63Q38HM4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim63Q38HM4 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.93□□□□□ -0.66
Trim63Q38HM4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.93□□□□□ -0.66
Trim63Q38HM4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms