Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a1Q04857 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a1Q04857 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.73□□□□□ -0.05
Col6a1Q04857 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a1Q04857 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a1Q04857 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Col6a1Q04857 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col6a1Q04857 Mir698-201ENSMUST00000102164 109 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm6222-202ENSMUST00000182143 629 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col6a1Q04857 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm10146-201ENSMUST00000072739 309 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col6a1Q04857 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a1Q04857 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.72□□□□□ -0.05
Col6a1Q04857 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a1Q04857 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Gm6023-201ENSMUST00000118217 606 ntBASIC14.71□□□□□ -0.05
Col6a1Q04857 Gm4986-201ENSMUST00000119731 549 ntBASIC14.71□□□□□ -0.05
Col6a1Q04857 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a1Q04857 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a1Q04857 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a1Q04857 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a1Q04857 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a1Q04857 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a1Q04857 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Col6a1Q04857 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.71□□□□□ -0.06
Col6a1Q04857 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.71□□□□□ -0.06
Col6a1Q04857 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a1Q04857 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a1Q04857 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col6a1Q04857 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.7□□□□□ -0.06
Col6a1Q04857 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.7□□□□□ -0.06
Col6a1Q04857 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Col6a1Q04857 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a1Q04857 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms