Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Scn1bP97952 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scn1bP97952 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scn1bP97952 Gm15483-201ENSMUST00000120338 456 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn1bP97952 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scn1bP97952 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.19□□□□□ -0.46
Scn1bP97952 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Scn1bP97952 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scn1bP97952 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn1bP97952 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1bP97952 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Scn1bP97952 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.18□□□□□ -0.46
Scn1bP97952 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.18□□□□□ -0.46
Scn1bP97952 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.18□□□□□ -0.46
Scn1bP97952 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.18□□□□□ -0.46
Scn1bP97952 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Scn1bP97952 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.18□□□□□ -0.46
Scn1bP97952 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1bP97952 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1bP97952 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.18□□□□□ -0.46
Scn1bP97952 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.17□□□□□ -0.46
Scn1bP97952 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Scn1bP97952 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scn1bP97952 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.17□□□□□ -0.46
Scn1bP97952 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms