Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SNRPFP62306 AC023141.5-201ENST00000458585 616 ntBASIC17.73■□□□□ 0.43
SNRPFP62306 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 ALG1L8P-201ENST00000533887 760 ntBASIC17.73■□□□□ 0.43
SNRPFP62306 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.73■□□□□ 0.43
SNRPFP62306 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.73■□□□□ 0.43
SNRPFP62306 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.73■□□□□ 0.43
SNRPFP62306 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.73■□□□□ 0.43
SNRPFP62306 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNRPFP62306 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SNRPFP62306 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNRPFP62306 MIR1233-2-201ENST00000408138 82 ntBASIC17.72■□□□□ 0.43
SNRPFP62306 MIR1233-1-201ENST00000408722 82 ntBASIC17.72■□□□□ 0.43
SNRPFP62306 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.72■□□□□ 0.43
SNRPFP62306 FAM58DP-201ENST00000428076 619 ntBASIC17.72■□□□□ 0.43
SNRPFP62306 CNN2P11-201ENST00000429351 262 ntBASIC17.72■□□□□ 0.43
SNRPFP62306 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.72■□□□□ 0.43
SNRPFP62306 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.72■□□□□ 0.43
SNRPFP62306 AC026979.3-201ENST00000607315 403 ntBASIC17.72■□□□□ 0.43
SNRPFP62306 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNRPFP62306 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 CDC14C-201ENST00000428251 1719 ntBASIC17.72■□□□□ 0.43
SNRPFP62306 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPFP62306 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNRPFP62306 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 AC022188.1-201ENST00000620960 1664 ntBASIC17.71■□□□□ 0.43
SNRPFP62306 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 AC011477.6-201ENST00000604980 1927 ntBASIC17.71■□□□□ 0.43
SNRPFP62306 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SNRPFP62306 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SNRPFP62306 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 GPS2P2-201ENST00000430745 888 ntBASIC17.71■□□□□ 0.43
SNRPFP62306 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.71■□□□□ 0.43
SNRPFP62306 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.71■□□□□ 0.43
SNRPFP62306 AL512356.2-201ENST00000546955 174 ntBASIC17.71■□□□□ 0.43
SNRPFP62306 AC243562.2-201ENST00000561247 970 ntBASIC17.71■□□□□ 0.43
SNRPFP62306 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRPFP62306 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPFP62306 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPFP62306 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.71■□□□□ 0.42
SNRPFP62306 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SNRPFP62306 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNRPFP62306 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms