Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Gm12490-201ENSMUST00000120255 560 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.35□□□□□ -0.43
Foxa1P35582 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.34□□□□□ -0.43
Foxa1P35582 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.34□□□□□ -0.43
Foxa1P35582 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Foxa1P35582 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.34□□□□□ -0.43
Foxa1P35582 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Gm12928-201ENSMUST00000117115 573 ntBASIC12.34□□□□□ -0.43
Foxa1P35582 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxa1P35582 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.34□□□□□ -0.43
Foxa1P35582 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxa1P35582 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxa1P35582 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxa1P35582 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.34□□□□□ -0.43
Foxa1P35582 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.34□□□□□ -0.43
Foxa1P35582 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.34□□□□□ -0.43
Foxa1P35582 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.34□□□□□ -0.43
Foxa1P35582 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Foxa1P35582 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Foxa1P35582 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Foxa1P35582 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxa1P35582 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Foxa1P35582 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Foxa1P35582 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.33□□□□□ -0.43
Foxa1P35582 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Foxa1P35582 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.33□□□□□ -0.44
Foxa1P35582 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Foxa1P35582 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.33□□□□□ -0.44
Foxa1P35582 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.33□□□□□ -0.44
Foxa1P35582 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.33□□□□□ -0.44
Foxa1P35582 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.33□□□□□ -0.44
Foxa1P35582 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.33□□□□□ -0.44
Foxa1P35582 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.33□□□□□ -0.44
Foxa1P35582 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms